BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B06SP1|AL429339
(919 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1626 1767 0.0
>3x_Contig1626
Length = 17698
Score = 1767 bits (885), Expect = 0.0
Identities = 904/917 (98%)
Strand = Plus / Minus
Query: 1 agtaaagaaggaaaatmaccgatattgtatgtggtgttagggtgtgttgtcaatgatatt 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3861 agtaaagaaggaaaataaccgatattgtatgtggtgttagggtgtgttgtcaatgatatt 3802
Query: 61 ccattaacctatgttctaccaccgttttggagtcgtgaccccattatcatctgcccggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3801 ccattaacctatgttctaccaccgttttggagtcgtgaccccattatcatctgcccggta 3742
Query: 121 gagtgtactattctctggttgacttaatgagccggaataccctctttggtaaatgttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3741 gagtgtactattctctggttgacttaatgagccggaataccctctttggtaaatgttttg 3682
Query: 181 ctcatggacacattatctgctttgamaagtcattatgcacataaaacacgaaacactttg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3681 ctcatggacacattatctgctttgaaaagtcattatgcacataaaacacgaaacactttg 3622
Query: 241 aaaaaggctacaatctaagcttcaaaagcgatgtgctggataagaagaaggagacaatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3621 aaaaaggctacaatctaagcttcaaaagcgatgtgctggataagaagaaggagacaatag 3562
Query: 301 cagccataaacgatacaataaccacaatttacttaagatggatgaatatmamagtmaact 360
||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||
Sbjct: 3561 cagccataaacgatacaataaccacaatttacttaagatggatgaatataaaagtaaact 3502
Query: 361 accgngaattcctatttctaagtgcangavgatcgccaggrcagatccagagtacatttt 420
|||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||
Sbjct: 3501 accgagaattcctatttctaagtgcaagaagatcgccaggacagatccagagtacatttt 3442
Query: 421 gaccagtcaagcggcttttgcmgctaccgcattcaccacagaattgttcatccagatgct 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3441 gaccagtcaagcggcttttgcagctaccgcattcaccacagaattgttcatccagatgct 3382
Query: 481 agcmgaggagacctgttctctagctcagatacacaagccaaccaaaactttgagattgaa 540
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3381 agcagaggagacctgttctctagctcagatacacaagcaaaccaaaactttgagattgaa 3322
Query: 541 ctatgaagacctatctaccgctatccgccacctggataagtttcaattcttgtcagatgt 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3321 ctatgaagacctatctaccgctatccgcaacctggataagtttcaattcttgtcagatgt 3262
Query: 601 cgttccgcaaactgagaatctggcctctctggtgagagaaaacaaagtcagatacactat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3261 cgttccgcaaactgagaatctggcctctctggtgagagaaaacaaagtcagatacactat 3202
Query: 661 tgtaaatcctagcccggaaatagatatagaaagtgaagatgaagttgatgaagctaatga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3201 tgtaaatcctagcccggaaatagatatagaaagtgaagatgaagttgatgaagctaatga 3142
Query: 721 acctgaagttggtgaacctgaagttgatgaagccgaagttgaagctgaagttgaagctga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3141 acctgaagttggtgaacctgaagttgatgaagccgaagttgaagctgaagttgaagctga 3082
Query: 781 agcagctgaacccgaaactcatacccttgatgaacctcgaccagaatcatcgtcctgaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3081 agcagctgaacccgaaactcatacccttgatgaacctcgaccagaatcatcgtcctgaac 3022
Query: 841 atcggttctcgaaatttctctactccccaaaaccatgtttctgaccccgaaaaatgcact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 atcggttctcgaaatttctctactccccaaaaccatgtttctgaccccgaaaaatgcact 2962
Query: 901 ccgagttgcgcccaaaa 917
|||||||||||||||||
Sbjct: 2961 ccgagttgcgcccaaaa 2945
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6163
Number of Sequences: 1807
Number of extensions: 6163
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)